I had the injectors cleaned by Aagard Moto Foundry. Getting the fuel rail bolts back in and tightened without rotating the engine was extremely challenging. I hope to never do that again.
With the new battery, rebuilt pump, restored injectors, and new plugs (original OEM H-D plugs I bought back in 2007 and never used), she started right up!
Thank you so much to all who offered help! I'll surely be posting a few more threads on here at some point as there is likely a lot of work left to be done. Tomorrow I'll do a light road test and see how the brakes, clutch, gearbox, etc are working.